Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | PFL_RS30155 | Not Available | - | 6763622 - 6764293 | 24246.3 |
| dapg hydrolase family protein | PFL_RS30160 | Not Available | + | 6764435 - 6765319 | 33774.3 |
| tetr/acrr family transcriptional regulator | PFL_RS30165 | Not Available | - | 6765371 - 6765973 | 22917.6 |
| hydroxymethylglutaryl-coa synthase | PFL_RS30170 | Not Available | + | 6766435 - 6767523 | 38533.8 |
| thiolase family protein | PFL_RS30175 | Not Available | + | 6767553 - 6768749 | 42497.4 |
| zn-ribbon domain-containing ob-fold protein | PFL_RS30180 | Not Available | + | 6768762 - 6769202 | 16645.4 |
| type iii polyketide synthase | PFL_RS30185 | Not Available | + | 6769411 - 6770460 | 38619.4 |
| mfs transporter | PFL_RS30190 | Not Available | + | 6770570 - 6771835 | 44864.6 |
| hypothetical protein | PFL_RS30195 | Not Available | + | 6771842 - 6772774 | 35406.0 |
| aminomethyl-transferring glycine dehydrogenase | PFL_RS30200 | Not Available | - | 6772782 - 6775655 | 103730.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


