Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino-acid n-acetyltransferase | PFL_RS30105 | Not Available | - | 6753045 - 6754343 | 47678.2 |
| acetylornithine deacetylase | PFL_RS30110 | Not Available | - | 6754480 - 6755637 | 41878.6 |
| inorganic triphosphatase | PFL_RS30115 | Not Available | + | 6755796 - 6757163 | 51724.7 |
| lrp/asnc family transcriptional regulator | PFL_RS30120 | Not Available | - | 6757173 - 6757643 | 17682.5 |
| hypothetical protein | PFL_RS30125 | Not Available | + | 6757768 - 6758085 | 11922.3 |
| gspe/pule family protein | PFL_RS30130 | Not Available | + | 6758199 - 6759977 | 65167.7 |
| methyl-accepting chemotaxis protein | PFL_RS30135 | Not Available | + | 6760048 - 6761655 | 57331.0 |
| spfh domain-containing protein | PFL_RS30140 | Not Available | + | 6761781 - 6762701 | 33295.6 |
| nfed family protein | PFL_RS30145 | Not Available | + | 6762712 - 6763161 | 16356.3 |
| duf2388 domain-containing protein | PFL_RS30150 | Not Available | + | 6763232 - 6763549 | 11012.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


