Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | PFL_RS30055 | Not Available | + | 6743640 - 6744278 | 23735.6 |
| type i pantothenate kinase | PFL_RS30060 | Not Available | - | 6744287 - 6745204 | 34073.6 |
| molybdopterin-binding protein | PFL_RS30065 | Not Available | - | 6745322 - 6745537 | 7636.33 |
| aliphatic sulfonates abc transporter atp-binding protein | PFL_RS30070 | Not Available | - | 6745572 - 6746378 | 29245.9 |
| aliphatic sulfonate abc transporter permease ssuc | PFL_RS30075 | Not Available | - | 6746375 - 6747163 | 28277.3 |
| fmnh2-dependent alkanesulfonate monooxygenase | PFL_RS30080 | Not Available | - | 6747173 - 6748321 | 41493.5 |
| sulfonate abc transporter substrate-binding protein | PFL_RS30085 | Not Available | - | 6748346 - 6749311 | 34613.7 |
| nadph-dependent fmn reductase | PFL_RS30090 | Not Available | - | 6749401 - 6749994 | 21673.4 |
| peroxiredoxin | PFL_RS30095 | Not Available | - | 6750306 - 6750944 | 24143.6 |
| oprd family porin | PFL_RS30100 | Not Available | - | 6751218 - 6752543 | 47863.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


