Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase | PFL_RS29955 | Not Available | + | 6721486 - 6722715 | 44196.3 |
| duf4399 domain-containing protein | PFL_RS29960 | Not Available | - | 6722776 - 6723213 | 15245.6 |
| transporter substrate-binding domain-containing protein | PFL_RS29965 | Not Available | + | 6723346 - 6724131 | 28546.2 |
| duf523 domain-containing protein | PFL_RS29970 | Not Available | - | 6724281 - 6724769 | 16865.3 |
| 2og-fe(ii) oxygenase | PFL_RS29975 | Not Available | - | 6724772 - 6725404 | 23861.5 |
| duf2059 domain-containing protein | PFL_RS29980 | Not Available | + | 6725566 - 6726318 | 27004.1 |
| alpha/beta hydrolase | PFL_RS29985 | Not Available | - | 6726453 - 6727391 | 35529.6 |
| duf6436 domain-containing protein | PFL_RS29990 | Not Available | + | 6727502 - 6728089 | 21479.6 |
| penicillin acylase family protein | PFL_RS29995 | Not Available | + | 6728185 - 6730605 | 89417.0 |
| glxa family transcriptional regulator | PFL_RS30000 | Not Available | - | 6730696 - 6731664 | 34627.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


