Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | PFL_RS29705 | Not Available | + | 6666140 - 6667141 | 36969.6 |
| arac family transcriptional regulator | PFL_RS29710 | Not Available | + | 6667134 - 6667964 | 30795.2 |
| sulfurtransferase | PFL_RS29715 | Not Available | - | 6668066 - 6668920 | 30602.3 |
| tetr/acrr family transcriptional regulator | PFL_RS29720 | Not Available | - | 6668954 - 6669625 | 25800.1 |
| coniferyl aldehyde dehydrogenase | PFL_RS29725 | Not Available | + | 6669725 - 6671200 | 54339.0 |
| hypothetical protein | PFL_RS29730 | Not Available | + | 6671228 - 6671773 | 19410.7 |
| gmc family oxidoreductase | PFL_RS29735 | Not Available | + | 6671948 - 6673543 | 57416.5 |
| pantetheine-phosphate adenylyltransferase | PFL_RS29740 | Not Available | + | 6673659 - 6674138 | 17822.5 |
| yfhl family 4fe-4s dicluster ferredoxin | PFL_RS29745 | Not Available | + | 6674273 - 6674524 | 9250.94 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | PFL_RS29750 | Not Available | - | 6674588 - 6675400 | 30147.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


