Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfur carrier protein this | PFL_RS29655 | Not Available | - | 6656451 - 6656651 | 7046.35 |
| duf423 domain-containing protein | PFL_RS29660 | Not Available | - | 6656722 - 6657102 | 13242.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | PFL_RS29665 | Not Available | + | 6657177 - 6657899 | 27448.1 |
| rna polymerase sigma factor rpoh | PFL_RS29670 | Not Available | - | 6658046 - 6658900 | 32564.6 |
| permease-like cell division protein ftsx | PFL_RS29675 | Not Available | - | 6659014 - 6660036 | 36801.1 |
| cell division atp-binding protein ftse | PFL_RS29680 | Not Available | - | 6660033 - 6660704 | 24568.2 |
| signal recognition particle-docking protein ftsy | PFL_RS29685 | Not Available | - | 6660701 - 6662194 | 52401.4 |
| pitrilysin family protein | PFL_RS29690 | Not Available | + | 6662550 - 6663905 | 49970.7 |
| pitrilysin family protein | PFL_RS29695 | Not Available | + | 6663898 - 6665388 | 52547.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | PFL_RS29700 | Not Available | + | 6665388 - 6666008 | 22596.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


