Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | PFL_RS29405 | Not Available | + | 6608600 - 6610468 | 67485.1 |
| ycei family protein | PFL_RS29410 | Not Available | - | 6610886 - 6611482 | 21158.1 |
| cytochrome b | PFL_RS29415 | Not Available | - | 6611515 - 6612066 | 19982.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | PFL_RS29420 | Not Available | + | 6612384 - 6613790 | 52610.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PFL_RS29425 | Not Available | + | 6613874 - 6614593 | 26325.8 |
| transporter substrate-binding domain-containing protein | PFL_RS29430 | Not Available | - | 6614610 - 6615461 | 31280.3 |
| rida family protein | PFL_RS29435 | Not Available | - | 6615541 - 6615891 | 12413.9 |
| d-amino acid dehydrogenase | PFL_RS29440 | Not Available | - | 6615912 - 6617153 | 44797.0 |
| lysr family transcriptional regulator | PFL_RS29445 | Not Available | + | 6617261 - 6618166 | 32449.5 |
| paqr family membrane homeostasis protein trha | PFL_RS29450 | Not Available | - | 6618242 - 6618859 | 22641.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


