Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murein transglycosylase a | PFL_RS29355 | Not Available | + | 6599256 - 6600431 | 42063.2 |
| mapeg family protein | PFL_RS29360 | Not Available | - | 6600475 - 6600858 | 13909.4 |
| eama family transporter | PFL_RS29365 | Not Available | - | 6600894 - 6601727 | 30866.4 |
| hypothetical protein | PFL_RS29370 | Not Available | + | 6601795 - 6601989 | 6536.94 |
| sodium:proton antiporter | PFL_RS29375 | Not Available | + | 6602039 - 6603298 | 45217.9 |
| formate/nitrite transporter family protein | PFL_RS29380 | Not Available | - | 6603299 - 6604186 | 32369.8 |
| acyl-coa thioesterase | PFL_RS29385 | Not Available | - | 6604260 - 6604664 | 15060.0 |
| adenosylhomocysteinase | PFL_RS29390 | Not Available | + | 6604992 - 6606401 | 51391.7 |
| methylenetetrahydrofolate reductase | PFL_RS29395 | Not Available | + | 6606591 - 6607436 | 31254.0 |
| abc transporter substrate-binding protein | PFL_RS29400 | Not Available | + | 6607561 - 6608376 | 30568.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


