Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | PFL_RS29255 | Not Available | + | 6576835 - 6578172 | 48363.7 |
| nad(p)/fad-dependent oxidoreductase | PFL_RS29260 | Not Available | + | 6578236 - 6579414 | 42578.0 |
| yccs family putative transporter | PFL_RS29265 | Not Available | + | 6579539 - 6581731 | 80991.4 |
| abc transporter substrate-binding protein | PFL_RS29270 | Not Available | - | 6581818 - 6582555 | 27793.4 |
| gnat family n-acetyltransferase | PFL_RS29275 | Not Available | + | 6582833 - 6583285 | 17009.4 |
| helix-turn-helix domain-containing protein | PFL_RS29280 | Not Available | - | 6583289 - 6583585 | 10984.1 |
| m48 family metallopeptidase | PFL_RS29285 | Not Available | - | 6583609 - 6584121 | 19738.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | PFL_RS29290 | Not Available | - | 6584164 - 6586287 | 79267.4 |
| polysaccharide lyase family 7 protein | PFL_RS29295 | Not Available | + | 6586604 - 6587275 | 24706.0 |
| class ii fructose-bisphosphate aldolase | PFL_RS29300 | Not Available | - | 6587437 - 6588501 | 38396.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


