Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | PFL_RS29105 | Not Available | - | 6545171 - 6546148 | 35909.9 |
| lysozyme inhibitor lpri family protein | PFL_RS29110 | Not Available | + | 6546385 - 6546786 | 14526.0 |
| hydroxyisourate hydrolase | PFL_RS29115 | Not Available | - | 6546895 - 6547245 | 12549.2 |
| nucleoside deaminase | PFL_RS29120 | Not Available | - | 6547242 - 6547751 | 18090.7 |
| nucleobase:cation symporter-2 family protein | PFL_RS29125 | Not Available | - | 6547807 - 6549144 | 46238.3 |
| lysr family transcriptional regulator | PFL_RS29130 | Not Available | + | 6549326 - 6550240 | 34134.3 |
| type ii toxin-antitoxin system rele/pare family toxin | PFL_RS29135 | Not Available | + | 6550340 - 6550594 | 9815.9 |
| helix-turn-helix domain-containing protein | PFL_RS29140 | Not Available | + | 6550578 - 6550901 | 12017.4 |
| duf3010 family protein | PFL_RS29145 | Not Available | + | 6550936 - 6551352 | 14892.0 |
| glxa family transcriptional regulator | PFL_RS29150 | Not Available | - | 6551390 - 6552349 | 35810.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


