Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline/glycine betaine abc transporter permease | PFL_RS02060 | Not Available | + | 465439 - 466290 | 30796.0 |
| glycine betaine/l-proline abc transporter atp-binding protein | PFL_RS02065 | Not Available | + | 466287 - 467117 | 30576.2 |
| histidine ammonia-lyase | PFL_RS02070 | Not Available | + | 467198 - 468721 | 53887.2 |
| histidine ammonia-lyase | PFL_RS02075 | Not Available | + | 468839 - 470377 | 54039.2 |
| amino acid permease | PFL_RS02080 | Not Available | + | 470534 - 471946 | 50385.2 |
| imidazolonepropionase | PFL_RS02085 | Not Available | + | 471957 - 473162 | 43174.7 |
| n-formylglutamate deformylase | PFL_RS02090 | Not Available | + | 473173 - 473973 | 29756.3 |
| prolyl aminopeptidase | PFL_RS02095 | Not Available | + | 474176 - 475147 | 36380.1 |
| d-aminoacyl-trna deacylase | PFL_RS02100 | Not Available | + | 475144 - 475581 | 15442.7 |
| glucan biosynthesis protein g | PFL_RS02105 | Not Available | + | 475858 - 477690 | 67822.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


