Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase crec | PFL_RS28950 | Not Available | - | 6510657 - 6512075 | 52543.5 |
| two-component system response regulator creb | PFL_RS28955 | Not Available | - | 6512075 - 6512755 | 25138.5 |
| atp-dependent zinc protease | PFL_RS28960 | Not Available | - | 6512815 - 6513315 | 18524.2 |
| acyltransferase | PFL_RS28965 | Not Available | + | 6513553 - 6514440 | 33984.7 |
| glutathionylspermidine synthase family protein | PFL_RS28970 | Not Available | - | 6514441 - 6515598 | 43077.7 |
| duf1190 domain-containing protein | PFL_RS28975 | Not Available | - | 6515595 - 6516293 | 24734.4 |
| duf350 domain-containing protein | PFL_RS28980 | Not Available | - | 6516304 - 6516732 | 14866.6 |
| duf2780 domain-containing protein | PFL_RS28985 | Not Available | - | 6516871 - 6517437 | 18327.9 |
| sigma-70 family rna polymerase sigma factor | PFL_RS28990 | Not Available | + | 6517703 - 6518305 | 23022.6 |
| anti-sigma factor domain-containing protein | PFL_RS28995 | Not Available | + | 6518302 - 6518976 | 24487.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


