Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polc-type dna polymerase iii | PFL_RS28905 | Not Available | + | 6501451 - 6502158 | 26502.7 |
| rna polymerase sigma factor | PFL_RS28910 | Not Available | + | 6502427 - 6502945 | 19655.8 |
| fecr domain-containing protein | PFL_RS28915 | Not Available | + | 6502942 - 6503919 | 36163.4 |
| tonb-dependent siderophore receptor | PFL_RS28920 | Not Available | + | 6504101 - 6506530 | 88039.3 |
| pepsy domain-containing protein | PFL_RS28925 | Not Available | + | 6506594 - 6507715 | 41160.9 |
| hypothetical protein | PFL_RS28930 | Not Available | + | 6507712 - 6507900 | 6562.27 |
| hypothetical protein | PFL_RS28935 | Not Available | - | 6507847 - 6508299 | 16676.8 |
| glutathione s-transferase | PFL_RS28940 | Not Available | + | 6508400 - 6509029 | 23487.2 |
| hypothetical protein | PFL_RS32995 | Not Available | - | 6509026 - 6509196 | 6495.85 |
| cell envelope integrity protein cred | PFL_RS28945 | Not Available | - | 6509189 - 6510565 | 51301.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


