Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase biob | PFL_RS28855 | Not Available | - | 6488307 - 6489362 | 38803.4 |
| comf family protein | PFL_RS28860 | Not Available | + | 6489453 - 6490193 | 27356.3 |
| tobe domain-containing protein | PFL_RS28865 | Not Available | + | 6490259 - 6491023 | 27318.1 |
| phox family phosphatase | PFL_RS28870 | Not Available | + | 6491108 - 6493012 | 68504.2 |
| serine/threonine protein kinase | PFL_RS28875 | Not Available | + | 6493171 - 6494145 | 37172.4 |
| eama family transporter rard | PFL_RS28880 | Not Available | + | 6494385 - 6495272 | 32964.1 |
| glycine cleavage system protein r | PFL_RS28885 | Not Available | - | 6495495 - 6496013 | 18729.8 |
| malate synthase g | PFL_RS28890 | Not Available | + | 6496558 - 6498735 | 78863.0 |
| response regulator | PFL_RS28895 | Not Available | - | 6498815 - 6499261 | 16010.7 |
| putative nucleotidyltransferase substrate binding domain-containing protein | PFL_RS28900 | Not Available | + | 6499520 - 6501454 | 72345.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


