Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PFL_RS28805 | Not Available | + | 6475763 - 6476692 | 34819.5 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | PFL_RS28810 | Not Available | - | 6476930 - 6478708 | 64251.6 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | PFL_RS28815 | Not Available | - | 6478892 - 6480688 | 64602.8 |
| ggdef domain-containing protein | PFL_RS28820 | Not Available | - | 6480780 - 6482072 | 48342.2 |
| phenylacyl-coa dehydrogenase | PFL_RS28825 | Not Available | - | 6482293 - 6484098 | 65587.7 |
| hypothetical protein | PFL_RS28830 | Not Available | - | 6484395 - 6484691 | 10253.9 |
| dethiobiotin synthase | PFL_RS28835 | Not Available | - | 6484799 - 6485479 | 23295.4 |
| malonyl-acp o-methyltransferase bioc | PFL_RS28840 | Not Available | - | 6485476 - 6486288 | 29342.2 |
| alpha/beta fold hydrolase | PFL_RS28845 | Not Available | - | 6486281 - 6487012 | 25609.6 |
| 8-amino-7-oxononanoate synthase | PFL_RS28850 | Not Available | - | 6487005 - 6488183 | 41905.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


