Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prka family serine protein kinase | PFL_RS28660 | Not Available | + | 6438259 - 6440181 | 73821.7 |
| yeah/yhbh family protein | PFL_RS28665 | Not Available | + | 6440300 - 6441574 | 48668.8 |
| spovr family protein | PFL_RS28670 | Not Available | + | 6441571 - 6443133 | 61144.3 |
| multifunctional cca addition/repair protein | PFL_RS28675 | Not Available | + | 6443200 - 6444429 | 45921.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PFL_RS28680 | Not Available | - | 6444476 - 6444991 | 18926.2 |
| dihydroneopterin aldolase | PFL_RS28685 | Not Available | - | 6444982 - 6445335 | 13123.7 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | PFL_RS28690 | Not Available | + | 6445410 - 6445979 | 20394.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | PFL_RS28695 | Not Available | - | 6446025 - 6447050 | 36477.2 |
| 30s ribosomal protein s21 | PFL_RS32350 | Not Available | + | 6447251 - 6447466 | 8386.25 |
| dna primase | PFL_RS28705 | Not Available | + | 6447950 - 6449923 | 73572.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


