Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| terb family tellurite resistance protein | PFL_RS28610 | Not Available | - | 6427697 - 6428464 | 28541.5 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | PFL_RS28615 | Not Available | - | 6428466 - 6429140 | 24194.4 |
| aminoglycoside phosphotransferase family protein | PFL_RS28620 | Not Available | - | 6429137 - 6430162 | 38879.4 |
| lps-assembly protein lptd | PFL_RS28625 | Not Available | + | 6430293 - 6433130 | 106306.0 |
| peptidylprolyl isomerase sura | PFL_RS28630 | Not Available | + | 6433111 - 6434427 | 48794.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PFL_RS28635 | Not Available | + | 6434424 - 6435413 | 35393.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | PFL_RS28640 | Not Available | + | 6435410 - 6436222 | 29809.0 |
| co2+/mg2+ efflux protein apag | PFL_RS28645 | Not Available | + | 6436347 - 6436727 | 13663.2 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | PFL_RS28650 | Not Available | + | 6436727 - 6437596 | 32528.0 |
| thiosulfate sulfurtransferase glpe | PFL_RS28655 | Not Available | + | 6437630 - 6437959 | 11925.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


