Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | PFL_RS28560 | Not Available | - | 6414496 - 6415941 | 51906.8 |
| iron-containing alcohol dehydrogenase | PFL_RS28565 | Not Available | - | 6416015 - 6417163 | 39643.2 |
| sigma-54-dependent fis family transcriptional regulator | PFL_RS28570 | Not Available | - | 6417361 - 6418734 | 50939.4 |
| abc transporter permease | PFL_RS28575 | Not Available | - | 6418837 - 6419661 | 29520.1 |
| abc transporter permease | PFL_RS28580 | Not Available | - | 6419675 - 6420922 | 45690.8 |
| abc transporter substrate-binding protein | PFL_RS28585 | Not Available | - | 6421071 - 6422114 | 37967.2 |
| abc transporter atp-binding protein | PFL_RS28590 | Not Available | - | 6422158 - 6423282 | 41105.6 |
| response regulator | PFL_RS28595 | Not Available | - | 6423545 - 6424174 | 22756.0 |
| pas domain s-box protein | PFL_RS28600 | Not Available | - | 6424188 - 6426587 | 89675.1 |
| alpha/beta hydrolase family protein | PFL_RS28605 | Not Available | + | 6426662 - 6427651 | 35645.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


