Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate/anthranilate synthase component ii | PFL_RS28510 | Not Available | - | 6402709 - 6403302 | 21703.2 |
| abc transporter atp-binding protein | PFL_RS28515 | Not Available | - | 6404191 - 6405822 | 60188.0 |
| abc transporter permease | PFL_RS32495 | Not Available | - | 6405825 - 6406652 | 29411.8 |
| abc transporter permease | PFL_RS32500 | Not Available | - | 6406656 - 6407615 | 34216.1 |
| abc transporter substrate-binding protein | PFL_RS28530 | Not Available | - | 6407668 - 6409269 | 57955.2 |
| rrf2 family transcriptional regulator | PFL_RS28535 | Not Available | + | 6409508 - 6409948 | 16396.9 |
| anthranilate synthase component i | PFL_RS28540 | Not Available | - | 6410101 - 6411588 | 54213.2 |
| phosphoglycolate phosphatase | PFL_RS28545 | Not Available | - | 6411660 - 6412478 | 29894.4 |
| ribulose-phosphate 3-epimerase | PFL_RS28550 | Not Available | - | 6412475 - 6413149 | 24091.3 |
| iron-containing alcohol dehydrogenase | PFL_RS28555 | Not Available | - | 6413230 - 6414378 | 40064.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


