Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitronate monooxygenase family protein | PFL_RS28460 | Not Available | + | 6394655 - 6395623 | 34585.6 |
| duf805 domain-containing protein | PFL_RS28465 | Not Available | + | 6395720 - 6396640 | 32762.4 |
| sdr family oxidoreductase | PFL_RS28470 | Not Available | + | 6396703 - 6397491 | 29015.6 |
| histidine triad nucleotide-binding protein | PFL_RS28475 | Not Available | + | 6397562 - 6397900 | 12775.5 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | PFL_RS28480 | Not Available | + | 6398028 - 6398675 | 23930.7 |
| osmc family protein | PFL_RS28485 | Not Available | - | 6398748 - 6399170 | 15036.3 |
| camp-activated global transcriptional regulator crp | PFL_RS28490 | Not Available | + | 6399407 - 6400051 | 24193.5 |
| lipoyl protein ligase domain-containing protein | PFL_RS28495 | Not Available | - | 6400048 - 6400749 | 25462.4 |
| indole-3-glycerol phosphate synthase trpc | PFL_RS28500 | Not Available | - | 6400817 - 6401653 | 30287.6 |
| anthranilate phosphoribosyltransferase | PFL_RS28505 | Not Available | - | 6401650 - 6402699 | 37147.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


