Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusg | PFL_RS28360 | Not Available | - | 6378217 - 6378750 | 20009.1 |
| preprotein translocase subunit sece | PFL_RS28365 | Not Available | - | 6378760 - 6379128 | 13281.8 |
| Trna-trp | Not Available | Not Available | + | 6379174 - 6379249 | Not Available |
| elongation factor tu | PFL_RS28375 | Not Available | - | 6379304 - 6380497 | 43715.5 |
| Trna-thr | Not Available | Not Available | + | 6380582 - 6380657 | Not Available |
| Trna-gly | Not Available | Not Available | + | 6380684 - 6380757 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 6380782 - 6380866 | Not Available |
| hypothetical protein | PFL_RS28395 | Not Available | - | 6381009 - 6381455 | 16865.4 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | PFL_RS28400 | Not Available | - | 6381619 - 6382581 | 34893.1 |
| 5s ribosomal rna | Not Available | Not Available | + | 6382750 - 6382865 | Not Available |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


