Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | PFL_RS28310 | Not Available | - | 6362707 - 6363900 | 43715.5 |
| elongation factor g | PFL_RS28315 | Not Available | - | 6363935 - 6366082 | 78746.0 |
| 30s ribosomal protein s7 | PFL_RS28320 | Not Available | - | 6366113 - 6366583 | 17662.6 |
| 30s ribosomal protein s12 | PFL_RS28325 | Not Available | - | 6366695 - 6367066 | 13753.7 |
| dna-directed rna polymerase subunit beta' | PFL_RS28330 | Not Available | - | 6367268 - 6371467 | 154552.0 |
| dna-directed rna polymerase subunit beta | PFL_RS28335 | Not Available | - | 6371532 - 6375605 | 150796.0 |
| 50s ribosomal protein l7/l12 | PFL_RS28340 | Not Available | - | 6375827 - 6376192 | 12461.2 |
| 50s ribosomal protein l10 | PFL_RS28345 | Not Available | - | 6376273 - 6376773 | 17630.4 |
| 50s ribosomal protein l1 | PFL_RS28350 | Not Available | - | 6376972 - 6377667 | 24063.3 |
| 50s ribosomal protein l11 | PFL_RS28355 | Not Available | - | 6377667 - 6378098 | 14913.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


