Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | PFL_RS28260 | Not Available | - | 6357834 - 6358025 | 7172.78 |
| 50s ribosomal protein l16 | PFL_RS28265 | Not Available | - | 6358025 - 6358438 | 15417.2 |
| 30s ribosomal protein s3 | PFL_RS28270 | Not Available | - | 6358451 - 6359137 | 25693.4 |
| 50s ribosomal protein l22 | PFL_RS28275 | Not Available | - | 6359151 - 6359483 | 11911.6 |
| 30s ribosomal protein s19 | PFL_RS28280 | Not Available | - | 6359497 - 6359772 | 10334.9 |
| 50s ribosomal protein l2 | PFL_RS32335 | Not Available | - | 6359789 - 6360613 | 29651.0 |
| 50s ribosomal protein l23 | PFL_RS28290 | Not Available | - | 6360628 - 6360927 | 10945.3 |
| 50s ribosomal protein l4 | PFL_RS28295 | Not Available | - | 6360924 - 6361526 | 21950.4 |
| 50s ribosomal protein l3 | PFL_RS28300 | Not Available | - | 6361539 - 6362174 | 22547.0 |
| 30s ribosomal protein s10 | PFL_RS28305 | Not Available | - | 6362255 - 6362566 | 11753.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


