Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | PFL_RS28115 | Not Available | + | 6331250 - 6332695 | 54302.5 |
| hypothetical protein | PFL_RS28120 | Not Available | + | 6332674 - 6333855 | 43536.7 |
| hypothetical protein | PFL_RS28125 | Not Available | + | 6333866 - 6336277 | 89513.2 |
| hypothetical protein | PFL_RS28130 | Not Available | + | 6336344 - 6337285 | 35085.1 |
| hypothetical protein | PFL_RS28135 | Not Available | + | 6337299 - 6338585 | 46746.6 |
| hypothetical protein | PFL_RS28140 | Not Available | + | 6338589 - 6340415 | 65751.5 |
| hypothetical protein | PFL_RS28145 | Not Available | + | 6340430 - 6341482 | 38061.1 |
| single-stranded dna-binding protein | PFL_RS28150 | Not Available | - | 6341580 - 6342089 | 18786.0 |
| mfs transporter | PFL_RS28155 | Not Available | - | 6342099 - 6343493 | 49383.8 |
| excinuclease abc subunit uvra | PFL_RS28160 | Not Available | + | 6343672 - 6346506 | 104189.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


