Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | PFL_RS28065 | Not Available | + | 6314992 - 6319278 | 156068.0 |
| mechanosensitive ion channel family protein | PFL_RS28070 | Not Available | - | 6319615 - 6321720 | 76261.9 |
| mfs transporter | PFL_RS28075 | Not Available | + | 6321934 - 6323145 | 41443.2 |
| glxa family transcriptional regulator | PFL_RS28080 | Not Available | - | 6323162 - 6324160 | 35456.5 |
| cysteine hydrolase family protein | PFL_RS28085 | Not Available | + | 6324263 - 6324829 | 20190.0 |
| 3-dehydroquinate synthase | PFL_RS28090 | Not Available | + | 6325561 - 6327444 | 68250.4 |
| ubia family prenyltransferase | PFL_RS28095 | Not Available | + | 6327441 - 6328325 | 32178.5 |
| eboa domain-containing protein | PFL_RS28100 | Not Available | + | 6328322 - 6329089 | 28429.0 |
| tatd family hydrolase | PFL_RS28105 | Not Available | + | 6329141 - 6330025 | 32904.3 |
| metabolite traffic protein eboe | PFL_RS28110 | Not Available | + | 6330022 - 6331260 | 45881.5 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


