Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | PFL_RS28015 | Not Available | + | 6306724 - 6307380 | 24339.1 |
| thioredoxin | PFL_RS28020 | Not Available | + | 6307443 - 6308315 | 32007.4 |
| hypothetical protein | PFL_RS28025 | Not Available | - | 6308399 - 6308740 | 12103.5 |
| duf2796 domain-containing protein | PFL_RS28030 | Not Available | + | 6308875 - 6309483 | 21796.4 |
| abc transporter atp-binding protein | PFL_RS28035 | Not Available | + | 6309545 - 6310255 | 25631.7 |
| abc transporter permease | PFL_RS28040 | Not Available | + | 6310257 - 6311522 | 46015.4 |
| duf3299 domain-containing protein | PFL_RS28045 | Not Available | + | 6311548 - 6312069 | 18861.6 |
| ompw family protein | PFL_RS28050 | Not Available | + | 6312237 - 6312935 | 25013.8 |
| nad-dependent epimerase/dehydratase family protein | PFL_RS28055 | Not Available | - | 6312995 - 6313924 | 32872.3 |
| sugar nucleotide-binding protein | PFL_RS28060 | Not Available | - | 6313917 - 6314801 | 32367.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


