Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS32925 | Not Available | - | 6274396 - 6274956 | 21036.7 |
| glycosyltransferase family 2 protein | PFL_RS27870 | Not Available | - | 6274969 - 6276027 | 39513.7 |
| ggdef domain-containing protein | PFL_RS27875 | Not Available | + | 6277164 - 6278216 | 38483.6 |
| hypothetical protein | PFL_RS27880 | Not Available | + | 6278373 - 6278744 | 13280.8 |
| duf3828 domain-containing protein | PFL_RS27885 | Not Available | + | 6278755 - 6279204 | 16715.8 |
| dienelactone hydrolase family protein | PFL_RS27890 | Not Available | + | 6279331 - 6280413 | 39682.5 |
| copper-containing nitrite reductase | PFL_RS27895 | Not Available | - | 6280447 - 6281535 | 39035.7 |
| yfap family protein | PFL_RS27900 | Not Available | - | 6281649 - 6282467 | 29542.8 |
| duf2300 domain-containing protein | PFL_RS27905 | Not Available | - | 6282471 - 6284114 | 61311.8 |
| alpha-2-macroglobulin | PFL_RS27910 | Not Available | - | 6284116 - 6288693 | 166761.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


