Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | PFL_RS27815 | Not Available | - | 6261609 - 6262400 | 30359.6 |
| glycosyltransferase family 2 protein | PFL_RS27820 | Not Available | - | 6262397 - 6263398 | 36773.9 |
| hypothetical protein | PFL_RS27825 | Not Available | - | 6263491 - 6265530 | 74217.3 |
| gdp-mannose 4,6-dehydratase | PFL_RS27830 | Not Available | - | 6265620 - 6266555 | 34073.1 |
| gdp-mannose 4,6-dehydratase | PFL_RS27835 | Not Available | - | 6266539 - 6267573 | 38707.2 |
| glycosyltransferase family 4 protein | PFL_RS27840 | Not Available | - | 6267685 - 6269217 | 58414.9 |
| glycosyltransferase | PFL_RS27845 | Not Available | - | 6269218 - 6271743 | 93828.8 |
| abc transporter atp-binding protein | PFL_RS27850 | Not Available | - | 6271922 - 6273289 | 49969.9 |
| abc transporter permease | PFL_RS27855 | Not Available | - | 6273279 - 6274097 | 30659.4 |
| hypothetical protein | PFL_RS27860 | Not Available | - | 6274097 - 6274399 | 11264.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


