Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent peptidase | PFL_RS27770 | Not Available | + | 6249623 - 6250435 | 31064.4 |
| inorganic diphosphatase | PFL_RS27775 | Not Available | + | 6250653 - 6251180 | 19305.1 |
| hypothetical protein | PFL_RS32330 | Not Available | + | 6251196 - 6251585 | 14252.0 |
| sulfate adenylyltransferase subunit cysd | PFL_RS27780 | Not Available | + | 6251838 - 6253295 | 55509.7 |
| fad/nad(p)-binding protein | PFL_RS27785 | Not Available | + | 6253295 - 6254716 | 52668.6 |
| adenylyl-sulfate kinase | PFL_RS27790 | Not Available | + | 6254746 - 6256623 | 68613.9 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | PFL_RS27795 | Not Available | - | 6256603 - 6258108 | 54797.8 |
| fad-dependent oxidoreductase | PFL_RS27800 | Not Available | - | 6258326 - 6259933 | 57400.1 |
| sdr family oxidoreductase | PFL_RS27805 | Not Available | - | 6259934 - 6261199 | 45414.2 |
| gtra family protein | PFL_RS27810 | Not Available | - | 6261196 - 6261609 | 15112.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


