Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | PFL_RS27720 | Not Available | - | 6235427 - 6236776 | 48116.8 |
| sigma-54-dependent fis family transcriptional regulator | PFL_RS27725 | Not Available | - | 6236908 - 6238830 | 70436.4 |
| aldehyde dehydrogenase family protein | PFL_RS27730 | Not Available | + | 6239206 - 6240726 | 55032.0 |
| ethanolamine utilization protein euth | PFL_RS27735 | Not Available | + | 6240904 - 6242184 | 44841.1 |
| ethanolamine ammonia-lyase reactivating factor euta | PFL_RS27740 | Not Available | + | 6242210 - 6243646 | 51357.9 |
| ethanolamine ammonia-lyase | PFL_RS27745 | Not Available | + | 6243676 - 6245871 | 80196.3 |
| ethanolamine ammonia-lyase subunit eutb | PFL_RS27750 | Not Available | + | 6245923 - 6247317 | 50195.1 |
| ethanolamine ammonia-lyase subunit eutc | PFL_RS27755 | Not Available | + | 6247329 - 6248153 | 29972.6 |
| n-acetyltransferase | PFL_RS27760 | Not Available | + | 6248260 - 6248718 | 17686.2 |
| deda family protein | PFL_RS27765 | Not Available | + | 6248961 - 6249617 | 23998.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


