Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | PFL_RS27670 | Not Available | + | 6227566 - 6228252 | 25304.6 |
| bifunctional deda family/phosphatase pap2 family protein | PFL_RS27675 | Not Available | + | 6228298 - 6229614 | 47361.5 |
| lon peptidase substrate-binding domain-containing protein | PFL_RS27680 | Not Available | - | 6229655 - 6230245 | 21799.3 |
| lrgb family protein | PFL_RS27685 | Not Available | - | 6230256 - 6230972 | 24973.7 |
| cida/lrga family protein | PFL_RS27690 | Not Available | - | 6230969 - 6231331 | 13021.8 |
| maoc family dehydratase | PFL_RS27695 | Not Available | + | 6231510 - 6231965 | 16768.5 |
| c13 family peptidase | PFL_RS27700 | Not Available | + | 6232069 - 6233787 | 62287.5 |
| oxidoreductase | PFL_RS27705 | Not Available | + | 6233816 - 6234457 | 23399.7 |
| ycek/yidq family lipoprotein | PFL_RS27710 | Not Available | - | 6234518 - 6234805 | 9553.8 |
| flavin prenyltransferase ubix | PFL_RS27715 | Not Available | - | 6234798 - 6235430 | 22869.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


