Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | PFL_RS27470 | Not Available | - | 6184851 - 6187370 | 92556.5 |
| hypothetical protein | PFL_RS27475 | Not Available | + | 6187501 - 6187920 | 14750.1 |
| cation diffusion facilitator family transporter | PFL_RS27480 | Not Available | + | 6187948 - 6188844 | 31903.8 |
| duf6515 family protein | PFL_RS27485 | Not Available | - | 6188838 - 6189938 | 41236.5 |
| lrp/asnc family transcriptional regulator | PFL_RS27490 | Not Available | + | 6190355 - 6190834 | 18036.8 |
| duf2788 domain-containing protein | PFL_RS27495 | Not Available | + | 6190945 - 6191154 | 7513.63 |
| pseudouridine synthase | PFL_RS27500 | Not Available | - | 6191149 - 6191715 | 21226.7 |
| amp nucleosidase | PFL_RS27505 | Not Available | - | 6191862 - 6193334 | 54821.7 |
| acyl-coa dehydrogenase family protein | PFL_RS27510 | Not Available | - | 6193434 - 6195086 | 59800.7 |
| hybrid sensor histidine kinase/response regulator | PFL_RS27515 | Not Available | - | 6195162 - 6197528 | 86542.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


