Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | PFL_RS27420 | Not Available | - | 6176104 - 6177438 | 48744.3 |
| hypothetical protein | PFL_RS27425 | Not Available | + | 6177654 - 6178112 | 16268.0 |
| alpha/beta fold hydrolase | PFL_RS27430 | Not Available | + | 6178190 - 6179239 | 37482.6 |
| drug/metabolite exporter yeda | PFL_RS27435 | Not Available | - | 6179240 - 6180148 | 31850.8 |
| lrp/asnc family transcriptional regulator | PFL_RS27440 | Not Available | + | 6180310 - 6180756 | 16181.8 |
| polc-type dna polymerase iii | PFL_RS27445 | Not Available | - | 6180767 - 6181378 | 22493.4 |
| nyn domain-containing protein | PFL_RS27450 | Not Available | - | 6181406 - 6181885 | 17508.0 |
| duf2076 domain-containing protein | PFL_RS27455 | Not Available | - | 6182022 - 6182804 | 27450.0 |
| ycic family protein | PFL_RS27460 | Not Available | + | 6182986 - 6183648 | 24393.7 |
| endonuclease/exonuclease/phosphatase family protein | PFL_RS27465 | Not Available | + | 6183737 - 6184813 | 40417.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


