Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6482 family protein | PFL_RS27080 | Not Available | - | 6098879 - 6099184 | 11186.5 |
| tigr00645 family protein | PFL_RS27085 | Not Available | - | 6099320 - 6099808 | 18321.9 |
| hypothetical protein | PFL_RS27090 | Not Available | + | 6099971 - 6101797 | 67471.2 |
| hypothetical protein | PFL_RS27095 | Not Available | - | 6101801 - 6102142 | 12442.0 |
| lon protease family protein | PFL_RS27100 | Not Available | - | 6102357 - 6104795 | 89122.1 |
| duf3015 domain-containing protein | PFL_RS27105 | Not Available | + | 6105072 - 6105560 | 17011.1 |
| duf4105 domain-containing protein | PFL_RS27110 | Not Available | + | 6105653 - 6107506 | 70142.0 |
| hypothetical protein | PFL_RS27115 | Not Available | + | 6107666 - 6108022 | 13633.7 |
| grea/greb family elongation factor | PFL_RS27120 | Not Available | + | 6108096 - 6108587 | 18054.0 |
| nadp-specific glutamate dehydrogenase | PFL_RS27125 | Not Available | - | 6108594 - 6109931 | 48448.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


