Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | PFL_RS01710 | Not Available | - | 385102 - 386214 | 40787.4 |
| abc transporter atp-binding protein | PFL_RS01715 | Not Available | - | 386300 - 387391 | 39779.8 |
| lysr substrate-binding domain-containing protein | PFL_RS01720 | Not Available | - | 387541 - 388458 | 32858.2 |
| hypothetical protein | PFL_RS01725 | Not Available | + | 388742 - 390325 | 58747.2 |
| bbe domain-containing protein | PFL_RS01730 | Not Available | - | 390709 - 392340 | 59765.4 |
| methyltransferase | PFL_RS01735 | Not Available | - | 392635 - 393846 | 45444.6 |
| abc transporter permease | PFL_RS01740 | Not Available | - | 393896 - 394585 | 25919.5 |
| abc transporter permease | PFL_RS01745 | Not Available | - | 394585 - 395277 | 24944.5 |
| abc transporter substrate-binding protein | PFL_RS01750 | Not Available | - | 395343 - 396095 | 27676.1 |
| abc transporter atp-binding protein | PFL_RS01755 | Not Available | - | 396109 - 396882 | 28205.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


