Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | + | 374422 - 374497 | Not Available |
| agmatinase | PFL_RS01665 | Not Available | - | 374611 - 375567 | 34220.1 |
| sodium:solute symporter | PFL_RS01670 | Not Available | - | 375597 - 376982 | 48687.1 |
| hypothetical protein | PFL_RS01675 | Not Available | + | 377181 - 377825 | 22552.3 |
| formate dehydrogenase subunit delta | PFL_RS01680 | Not Available | - | 377879 - 378100 | 8313.94 |
| formate dehydrogenase subunit alpha | PFL_RS01685 | Not Available | - | 378097 - 380994 | 105052.0 |
| nadh-quinone oxidoreductase subunit nuof | PFL_RS01690 | Not Available | - | 380991 - 382550 | 54669.6 |
| formate dehydrogenase subunit gamma | PFL_RS01695 | Not Available | - | 382550 - 383026 | 17465.8 |
| abc transporter permease | PFL_RS01700 | Not Available | - | 383432 - 384247 | 29665.3 |
| abc transporter permease | PFL_RS01705 | Not Available | - | 384255 - 385091 | 31271.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


