Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PFL_RS33040 | Not Available | - | 2208919 - 2209449 | 19300.9 |
| Putative site-specific dna methylase | PFL_RS09990 | Not Available | - | 2209446 - 2211179 | 63432.6 |
| hypothetical protein | PFL_RS31595 | Not Available | - | 2211169 - 2211507 | 12048.1 |
| hypothetical protein | PFL_RS31600 | Not Available | - | 2211507 - 2211728 | 8368.13 |
| hypothetical protein | PFL_RS10000 | Not Available | - | 2211725 - 2212144 | 15211.4 |
| Putative transcriptional regulator | PFL_RS10005 | Not Available | - | 2212189 - 2212515 | 12260.5 |
| hypothetical protein | PFL_RS10010 | Not Available | - | 2212508 - 2212687 | 7179.64 |
| phage antirepressor kilac domain-containing protein | PFL_RS10015 | Not Available | - | 2212674 - 2212958 | 10986.3 |
| hypothetical protein | PFL_RS10020 | Not Available | - | 2212968 - 2213552 | 21430.8 |
| hypothetical protein | PFL_RS31890 | Not Available | - | 2213549 - 2213728 | 6203.51 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


