Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sfnb family sulfur acquisition oxidoreductase | PFL_RS01260 | Not Available | - | 284046 - 285287 | 45067.8 |
| l-cystine abc transporter atp-binding protein tcyn | PFL_RS01265 | Not Available | - | 285774 - 286535 | 27902.0 |
| cystine abc transporter permease | PFL_RS01270 | Not Available | - | 286540 - 287205 | 24375.3 |
| cystine abc transporter substrate-binding protein | PFL_RS01275 | Not Available | - | 287205 - 288002 | 28975.9 |
| d-cysteine desulfhydrase | PFL_RS01280 | Not Available | - | 288276 - 289271 | 35154.2 |
| serine o-acetyltransferase epsc | PFL_RS01285 | Not Available | + | 289461 - 290387 | 33425.0 |
| choline transporter bett | PFL_RS01290 | Not Available | + | 290774 - 292735 | 72330.4 |
| hypothetical protein | PFL_RS01295 | Not Available | - | 292745 - 293002 | 9116.64 |
| sdr family oxidoreductase | PFL_RS01300 | Not Available | - | 293055 - 293795 | 26020.2 |
| lysr family transcriptional regulator | PFL_RS01305 | Not Available | + | 293927 - 294817 | 33229.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


