Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | PFL_RS01160 | Not Available | + | 262459 - 263274 | 28897.3 |
| mota/tolq/exbb proton channel family protein | PFL_RS01165 | Not Available | + | 263330 - 264055 | 25461.6 |
| biopolymer transporter exbd | PFL_RS01170 | Not Available | + | 264057 - 264458 | 14278.4 |
| alpha/beta hydrolase | PFL_RS01175 | Not Available | + | 264881 - 265462 | 21343.3 |
| sigma 54-interacting transcriptional regulator | PFL_RS01180 | Not Available | + | 265520 - 266452 | 33762.2 |
| metq/nlpa family abc transporter substrate-binding protein | PFL_RS01185 | Not Available | + | 266740 - 267522 | 28132.1 |
| amino acid abc transporter permease | PFL_RS01190 | Not Available | + | 267994 - 268659 | 24304.7 |
| amino acid abc transporter permease | PFL_RS01195 | Not Available | + | 268640 - 269299 | 24091.2 |
| amino acid abc transporter atp-binding protein | PFL_RS01200 | Not Available | + | 269296 - 270078 | 29053.7 |
| transporter substrate-binding domain-containing protein | PFL_RS01205 | Not Available | + | 270075 - 270959 | 32136.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


