Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | PFL_RS06210 | Not Available | + | 1399130 - 1400239 | 38754.4 |
| Tail protein | PFL_RS31800 | Not Available | + | 1400236 - 1400613 | 14610.1 |
| Glycoside hydrolase family 19 protein | PFL_RS06220 | Not Available | + | 1400664 - 1401227 | 20882.8 |
| Gp32 | PFL_RS06225 | Not Available | + | 1401335 - 1401850 | 18043.4 |
| Com translational regulator | PFL_RS31805 | Not Available | + | 1401924 - 1402109 | 6804.26 |
| putidacin l1 family lectin-like bacteriocin | PFL_RS06230 | Not Available | + | 1402118 - 1402960 | 31033.6 |
| cina family protein | PFL_RS06235 | Not Available | + | 1403261 - 1403761 | 17491.7 |
| Dna strand exchange and recombination protein with protease and nuclease activity | PFL_RS06240 | Not Available | + | 1403845 - 1404897 | 37465.2 |
| recombination regulator recx | PFL_RS06245 | Not Available | + | 1404906 - 1405373 | 17982.7 |
| Hypothetical protein | PFL_RS06250 | Not Available | - | 1405414 - 1406532 | 42013.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


