Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | PFL_RS00525 | Not Available | - | 104609 - 106267 | 59861.2 |
| terc family protein | PFL_RS00530 | Not Available | - | 106484 - 107251 | 28269.7 |
| citmhs family transporter | PFL_RS00535 | Not Available | - | 107319 - 108626 | 46422.1 |
| gfa family protein | PFL_RS00540 | Not Available | + | 108946 - 109347 | 14885.6 |
| duf4105 domain-containing protein | PFL_RS00545 | Not Available | - | 109459 - 111420 | 73537.6 |
| duf2388 domain-containing protein | PFL_RS00550 | Not Available | - | 111417 - 111737 | 11145.2 |
| duf2388 domain-containing protein | PFL_RS00555 | Not Available | - | 111765 - 112073 | 10814.0 |
| duf2388 domain-containing protein | PFL_RS00560 | Not Available | - | 112177 - 112494 | 10781.9 |
| duf1127 domain-containing protein | PFL_RS00565 | Not Available | - | 112662 - 112850 | 7205.49 |
| duf1127 domain-containing protein | PFL_RS00570 | Not Available | - | 113134 - 113349 | 8392.08 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


