Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | PFL_RS31700 | Not Available | + | 94188 - 94352 | 5710.38 |
| inhibitor of vertebrate lysozyme family protein | PFL_RS00480 | Not Available | + | 94355 - 94822 | 17132.3 |
| glutamate/aspartate:proton symporter gltp | PFL_RS00485 | Not Available | + | 95568 - 96899 | 47741.9 |
| nucleoside recognition domain-containing protein | PFL_RS00490 | Not Available | + | 97076 - 98305 | 43135.0 |
| abc-type transport auxiliary lipoprotein family protein | PFL_RS00495 | Not Available | - | 98378 - 99007 | 22494.1 |
| mlad family protein | PFL_RS00500 | Not Available | - | 99004 - 99942 | 33592.3 |
| abc transporter atp-binding protein | PFL_RS00505 | Not Available | - | 99944 - 100747 | 28524.4 |
| abc transporter permease | PFL_RS00510 | Not Available | - | 100744 - 101892 | 40340.7 |
| duf5924 family protein | PFL_RS00515 | Not Available | - | 101947 - 102990 | 38662.3 |
| pitrilysin family protein | PFL_RS00520 | Not Available | - | 103170 - 104552 | 51486.5 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


