Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1161 domain-containing protein | PFL_RS00225 | Not Available | + | 43521 - 43754 | 8394.08 |
| hypothetical protein | PFL_RS00230 | Not Available | - | 43761 - 44180 | 15755.0 |
| hypothetical protein | PFL_RS00235 | Not Available | - | 44223 - 44636 | 15307.1 |
| aminopeptidase | PFL_RS00240 | Not Available | + | 44696 - 45805 | 41921.0 |
| had family hydrolase | PFL_RS00245 | Not Available | - | 45834 - 46484 | 24490.1 |
| gamma carbonic anhydrase family protein | PFL_RS00250 | Not Available | - | 46513 - 47058 | 19500.5 |
| oligopeptidase a | PFL_RS00255 | Not Available | + | 47134 - 49212 | 76650.5 |
| yhev family putative zinc ribbon protein | PFL_RS00260 | Not Available | + | 49209 - 49487 | 10142.2 |
| tyrosine-protein phosphatase | PFL_RS00265 | Not Available | - | 49607 - 50266 | 24005.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | PFL_RS00270 | Not Available | + | 50560 - 51315 | 27191.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


