Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | PFL_RS00075 | Not Available | - | 16791 - 17744 | 36249.0 |
| dna-3-methyladenine glycosylase i | PFL_RS00080 | Not Available | + | 17826 - 18389 | 21411.8 |
| lysophospholipid acyltransferase | PFL_RS00085 | Not Available | + | 18432 - 19319 | 32553.8 |
| pilz domain-containing protein | PFL_RS00090 | Not Available | + | 19392 - 19631 | 8607.51 |
| tetratricopeptide repeat protein | PFL_RS00095 | Not Available | - | 19803 - 20120 | 11536.8 |
| trk system potassium transporter trka | PFL_RS00100 | Not Available | - | 20245 - 21618 | 49821.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | PFL_RS00105 | Not Available | - | 21641 - 22966 | 47860.8 |
| methionyl-trna formyltransferase | PFL_RS00110 | Not Available | - | 22963 - 23922 | 33864.0 |
| peptide deformylase | PFL_RS00115 | Not Available | - | 23992 - 24498 | 19340.3 |
| lysm peptidoglycan-binding domain-containing protein | PFL_RS00120 | Not Available | + | 24652 - 25662 | 36782.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


