Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | PFL_RS00020 | Not Available | + | 3913 - 6330 | 90373.6 |
| duf4265 domain-containing protein | PFL_RS00025 | Not Available | + | 6669 - 7193 | 19601.9 |
| duf4265 domain-containing protein | PFL_RS00030 | Not Available | + | 7345 - 7830 | 18105.3 |
| hypothetical protein | PFL_RS00035 | Not Available | + | 7827 - 8147 | 12095.3 |
| response regulator transcription factor | PFL_RS00040 | Not Available | - | 8175 - 8903 | 27948.0 |
| fecr domain-containing protein | PFL_RS00050 | Not Available | + | 9819 - 10817 | 36571.7 |
| chase2 domain-containing protein | PFL_RS00055 | Not Available | + | 10836 - 13154 | 85450.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PFL_RS00060 | Not Available | - | 13335 - 14105 | 28683.0 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | PFL_RS00065 | Not Available | - | 14189 - 14722 | 18931.8 |
| glycine--trna ligase subunit beta | PFL_RS00070 | Not Available | - | 14740 - 16794 | 75047.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


