Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Minor tail protein | PFL_RS18970 | Not Available | - | 4353565 - 4354248 | 24959.4 |
| L-shaped tail fiber protein | PFL_RS31665 | Not Available | - | 4354276 - 4355469 | 41598.5 |
| Minor tail protein m | PFL_RS18980 | Not Available | - | 4355466 - 4355804 | 12678.8 |
| hypothetical protein | PFL_RS18985 | Not Available | - | 4355861 - 4356172 | 11234.4 |
| Tail length tape-measure protein 1 | PFL_RS18990 | Not Available | - | 4356172 - 4359495 | 116621.0 |
| Hypothetical protein | PFL_RS18995 | Not Available | - | 4359492 - 4359743 | 9085.78 |
| Hypothetical protein | PFL_RS19000 | Not Available | - | 4359809 - 4360189 | 13978.7 |
| Tail constituent protein | PFL_RS19005 | Not Available | - | 4360193 - 4360849 | 22960.3 |
| Hypothetical protein | PFL_RS19010 | Not Available | - | 4361252 - 4361668 | 15051.8 |
| Putative tail protein | PFL_RS19015 | Not Available | - | 4361665 - 4362318 | 23789.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


