Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | + | 2248337 - 2248355 | Not Available |
| Histone-like prokaryotic dna-binding protein family | PFL_RS10670 | Not Available | + | 2337568 - 2337870 | 11476.8 |
| merr family transcriptional regulator | PFL_RS10675 | Not Available | + | 2337851 - 2338207 | 13918.9 |
| Attl | Not Available | Not Available | + | 2338081 - 2338092 | Not Available |
| Trna-pro; | Not Available | Not Available | + | 2338296 - 2338372 | Not Available |
| Integrase | PFL_RS10685 | Not Available | - | 2338455 - 2339189 | 27618.1 |
| Hypothetical protein | PFL_RS33235 | Not Available | + | 2339467 - 2339787 | 11581.8 |
| Hypothetical protein | PFL_RS10695 | Not Available | + | 2339919 - 2340170 | 9154.64 |
| hypothetical protein | PFL_RS10700 | Not Available | + | 2340415 - 2340690 | 10724.7 |
| hypothetical protein | PFL_RS10705 | Not Available | + | 2341160 - 2341510 | 11891.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


