Burkholderia cenocepacia J2315

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

The Burkholderia cepacia complex (Bcc) comprises at least nine closely related species which can be correctly identified only by polyphasic taxonomic approaches. Members of the complex are among the most metabolically versatile microorganisms known as they grow on more than 200 organic compounds, fix N2 and carry multiple antibiotic resistances. They are involved in important processes such as biodegradation of pollutants, biocontrol of root diseases but some also cause disease in plants, animals and humans. Bcc strains are isolated from very different habitats, including soil, rhizospheres, streams and infected plants, animals and human tissues, especially lungs of cystic fibrosis (CF) patients. Bcc strains have large and plastic genomes comprised of multiple (2 to 4) replicons, which is thought to give them their ecological versatility. Burkholderia cenocepacia is a Gram-negative bacterium which is ubiquitous in the environment and may cause a number of diseases in plants. Human infection can be caused by B.cenocepacia, especially in patients with CF and chronic granulomatous disease, and is often fatal. B.cenocepacia (strain AU1054) was recovered from the blood of a patient with CF. It is characterized as a representative of the B.cenocepacia PHDC clonal lineage. This clone appears to be widely distributed, having been found in CF patients in 24 US states and Europe, as well as in agricultural soil. Its genome consists of 3 chromosomes of 3.2 Mb, 2.6 Mb and 1.1 Mb (adapted from http://genome.jgi-psf.org/burca/burca.home.html). (HAMAP: BURCA)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cenocepacia
StrainJ2315

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Burkholderia cenocepacia J2315
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Burkholderia cenocepacia J2315

Accession NumberNC_011002.1

Gene Summary

Adenine Count

144278 bp

Thymine Count

145530 bp

Guanine Count

293453 bp

Cytosine Count

292716 bp

Genome Length

875977 bp

Protein-coding Genes

733 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
catalase/peroxidase hpiQU43_RS53200Not Available-3612912 - 361509879449.3
hypothetical proteinQU43_RS77160Not Available-3615200 - 36153284646.63
lysr substrate-binding domain-containing proteinQU43_RS53205Not Available-3615721 - 361668035349.4
atp-dependent dna helicase recgQU43_RS53210Not Available-3616817 - 361912983390.5
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaQU43_RS53215Not Available+3619297 - 362036438914.4
trna guanosine(34) transglycosylase tgtQU43_RS53220Not Available+3620482 - 362166944004.6
preprotein translocase subunit yajcQU43_RS53225Not Available+3621903 - 362222611448.3
protein translocase subunit secdQU43_RS53230Not Available+3622333 - 362435471655.6
protein translocase subunit secfQU43_RS53235Not Available+3624373 - 362532335255.3
s41 family peptidaseQU43_RS53240Not Available+3625542 - 362705654286.2

Displaying genes 7121 – 7130 of 7362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites