Burkholderia cenocepacia J2315

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

The Burkholderia cepacia complex (Bcc) comprises at least nine closely related species which can be correctly identified only by polyphasic taxonomic approaches. Members of the complex are among the most metabolically versatile microorganisms known as they grow on more than 200 organic compounds, fix N2 and carry multiple antibiotic resistances. They are involved in important processes such as biodegradation of pollutants, biocontrol of root diseases but some also cause disease in plants, animals and humans. Bcc strains are isolated from very different habitats, including soil, rhizospheres, streams and infected plants, animals and human tissues, especially lungs of cystic fibrosis (CF) patients. Bcc strains have large and plastic genomes comprised of multiple (2 to 4) replicons, which is thought to give them their ecological versatility. Burkholderia cenocepacia is a Gram-negative bacterium which is ubiquitous in the environment and may cause a number of diseases in plants. Human infection can be caused by B.cenocepacia, especially in patients with CF and chronic granulomatous disease, and is often fatal. B.cenocepacia (strain AU1054) was recovered from the blood of a patient with CF. It is characterized as a representative of the B.cenocepacia PHDC clonal lineage. This clone appears to be widely distributed, having been found in CF patients in 24 US states and Europe, as well as in agricultural soil. Its genome consists of 3 chromosomes of 3.2 Mb, 2.6 Mb and 1.1 Mb (adapted from http://genome.jgi-psf.org/burca/burca.home.html). (HAMAP: BURCA)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cenocepacia
StrainJ2315

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Burkholderia cenocepacia J2315
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Burkholderia cenocepacia J2315

Accession NumberNC_011002.1

Gene Summary

Adenine Count

144278 bp

Thymine Count

145530 bp

Guanine Count

293453 bp

Cytosine Count

292716 bp

Genome Length

875977 bp

Protein-coding Genes

733 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
30s ribosomal protein s1QU43_RS51395Not Available-3227772 - 322948462271.0
(d)cmp kinaseQU43_RS51400Not Available-3229627 - 323031324352.2
3-phosphoshikimate 1-carboxyvinyltransferaseQU43_RS51405Not Available-3230327 - 323163146292.9
prephenate dehydrogenaseQU43_RS51410Not Available-3231645 - 323257132299.7
prephenate dehydrataseQU43_RS51415Not Available-3232758 - 323384039019.6
3-phosphoserine/phosphohydroxythreonine transaminaseQU43_RS51420Not Available-3233874 - 323495639438.2
duf2059 domain-containing proteinQU43_RS51425Not Available-3235112 - 323571121288.6
dna gyrase subunit aQU43_RS51430Not Available-3235795 - 323839896314.6
outer membrane protein ompaQU43_RS51435Not Available+3238954 - 323962223968.6
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigQU43_RS51440Not Available+3239775 - 324047325154.1

Displaying genes 6761 – 6770 of 7362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites