Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus champanellensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus champanellensis 18P13 = JCM 17042
Accession NumberNC_021039.1
Gene Summary
Adenine Count
585343 bp
Thymine Count
584638 bp
Guanine Count
693827 bp
Cytosine Count
649573 bp
Genome Length
2573208 bp
Protein-coding Genes
2325 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein yunb | RUM_RS09600 | Not Available | + | 2086337 - 2086966 | 23015.2 |
| nad-dependent dna ligase liga | RUM_RS09605 | A3DE88 | + | 2086978 - 2088960 | 72842.7 |
| hypothetical protein | RUM_RS09610 | Not Available | - | 2088996 - 2089442 | 15791.8 |
| tyrosine-type recombinase/integrase | RUM_RS09615 | Q8RA66 | - | 2089452 - 2090447 | 38433.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | RUM_RS09620 | P37711 | - | 2090450 - 2091448 | 36655.6 |
| sapep family mn(2+)-dependent dipeptidase | RUM_RS09625 | O34944 | + | 2091599 - 2093020 | 50891.2 |
| flavodoxin family protein | RUM_RS09630 | Q58483 | + | 2093017 - 2093613 | 21855.7 |
| phenylpyruvate tautomerase mif-related protein | RUM_RS09635 | Not Available | + | 2093643 - 2093984 | 12469.9 |
| atp-binding cassette domain-containing protein | RUM_RS09640 | Not Available | + | 2094015 - 2096363 | 86509.8 |
| abc-2 family transporter protein | RUM_RS09645 | Not Available | + | 2096555 - 2096923 | 14273.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
